The sizes of these flagellin subunits are smaller than the flagellin proteins of S. meliloti (321 to 401 amino acids) [46, 47] and R. lupini (410-430 amino acids) [5]. The predicted molecular masses of the proteins are: FlaA-31 kDa; FlaB-31 kDa; FlaC-31 kDa; FlaD-34 kDa; FlaE-31; kDa; FlaH-36 kDa; FlaG-32 kDa. Our group has also determined the sequences of the flagellin genes of R. leguminosarum strain VF39SM (Genbank accession number GU071045 for flaA/B/C/D; GU071046 for flaE; GU071047 for flaH; and GU071048 for flaG) and found that the predicted flagellin

subunits of this strain are 99% to 100% click here identical to the corresponding flagellins in 3841. All of the flagellin proteins of R. leguminosarum EPZ015666 exhibit conserved residues at the amino and carboxy-terminal ends (Fig. 1 and 2). The central regions of the proteins, on the other hand, contain the highest variability. In terms

of flagellin sequence similarity, FlaA/B/C/E/G are highly similar, exhibiting 86-93% similarity to each other. The other two flagellins, FlaD and FlaH, are more distant, and respectively share 62% and 64% similarity with FlaA. Figure 1 Sequence alignment of the seven flagellin subunits of R. leguminosarum bv. viciae strain 3841. Asterisks represent conserved residues; colons represent conserved substitutions; dots represent semi-conserved substitutions. selleck chemicals The tryptic peptides detected in the upper band for 3841wt flagellar preparations are highlighted. FlaA peptides are highlighted in yellow; FlaB peptides are highlighted in gray; FlaC peptides are highlighted in teal. The peptides unique for the flagellin subunit are underlined. The glycosylation signals are in boxes. The

sequence coverage of FlaA, FlaB, and FlaC are 44%, 37%, and 31%, respectively. Figure 2 Alignment of R. leguminosarum VF39SM before flagellin amino acid sequences. Asterisks represent conserved residues; colons represent conserved substitutions; dots represent semi-conserved substitutions. The tryptic peptides detected in the flagellar samples by tandem mass spectrometry are highlighted. FlaA peptides are highlighted in yellow; FlaB peptides are highlighted in light gray; FlaC peptides are highlighted in dark gray; FlaG peptides are highlighted in teal; FlaE peptides are highlighted in moss green. The peptides unique for each flagellin are underlined. The glycosylation signals are in boxes. The sequence coverage of FlaA, FlaB, FlaC, FlaG, and FlaE are 46%, 43%, 29%, 28%, and 18%, respectively. Ultrastructure of the flagellar filament of R. leguminosarum Electron microscopy work confirmed that R. leguminosarum bv. viciae strain 3841 is subpolarly flagellated [28], while strain VF39SM is peritrichously flagellated, exhibiting 4-7 flagella per cell (Fig. 3).