None of the surfactant treatments significantly reduced the initial HAV titer (≤ 0.20 log10), which Ilomastat cell line argues in favor of the use of a dye-surfactant pre-treatment. It was not possible to measure the toxicity of surfactants to RV strains (Wa and SA11) because all surfactant doses affected the MA104 cells in culture (data not shown). The previously selected optimal dye concentration
for each virus (20 μM of EMA for all viruses, 50 μM of PMA for HAV and RV (SA11) and 75 μM of PMA for RV (Wa)) were tested in association with three concentrations of three surfactants. When inactivated HAV was assayed, Tween 20 only very slightly buy Ferrostatin-1 increased the efficacy of PMA (50 μM) (<− 0.7 log10) and did not increase the efficacy of EMA (20 μM) pretreatments. The pretreatments of inactivated HAV associating PMA (50 μM) with IGEPAL CA-630 or Triton ×100 improved the processing regardless of the concentration of surfactant tested. Indeed, the logarithmic reductions of RNA detected by RT-qPCR were included between - 2.34 log10 and - 2.49 log10 which was higher than the reduction of 1.06 log10 obtained learn more with PMA treatment at 50 μM. Similarly, the processing of inactivated HAV associating EMA (20 μM) with IGEPAL CA-630 or Triton ×100, regardless of the concentration of surfactant tested, enhanced the efficacy of the processing. Indeed, the logarithmic reductions of RNA detected by RT-qPCR were included between
– 2.23 log10 and – 2.68 log10 which was higher than the reduction of 1.75 log10 Sclareol obtained with EMA treatment at 20 μM. Finally, the treatment of HAV by the most promising IGEPAL CA-630 (0.5%) without monoazide or photoactivation before RNA extraction did not affect RT-qPCR detection of extracted RNA, which argues in favor of the use of a dye-surfactant pre-treatment (data not shown). When inactivated RV (SA11) was assayed, the efficacy of the processing with PMA (50 μM) was always slightly higher without surfactant. When inactivated RV (SA-11) was
assayed with EMA and surfactants, the highest improvement was found with Tween 20 (0.5%) leading to an increase of reduction of RNA detected by RT-qPCR of −0.76 log10 compared with treatment with EMA at 20 μM. However, the pre-treatment based on EMA also seemed to affect RNA detection from infectious RV (SA11) (− 0.72 log10) more than the pre-treatment based on PMA (− 0.30 log10). When inactivated RV (Wa) was assayed, none of the tested surfactants increased the efficacy of the dye pretreatments. By taking into account all these data, we selected pre-treatments with EMA (20 μM) and IGEPAL CA-630 (0.5%) for HAV, with EMA (20 μM) for RV (Wa) and PMA (50 μM) for RV (SA11) for their high efficiencies. Since different incubation times (30 min, 2 h, overnight) did not change the selected pre-treatment efficiencies (data not shown), an incubation time of 2 h was selected for the following studies.